stitch redesign tmp #988
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: PyChunkedGraph | |
| on: | |
| push: | |
| branches: | |
| - "main" | |
| - "pcgv3" | |
| pull_request: | |
| branches: | |
| - "main" | |
| - "pcgv3" | |
| jobs: | |
| unit-tests: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Check out code | |
| uses: actions/checkout@v4 | |
| - name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v3 | |
| - name: Build image | |
| uses: docker/build-push-action@v6 | |
| with: | |
| context: . | |
| load: true | |
| tags: seunglab/pychunkedgraph:${{ github.sha }} | |
| cache-from: type=gha | |
| cache-to: type=gha,mode=max | |
| - name: Run tests with coverage | |
| run: | | |
| docker run --name pcg-tests seunglab/pychunkedgraph:${{ github.sha }} \ | |
| /bin/sh -c "pytest --cov-config .coveragerc --cov=pychunkedgraph --cov-report=xml:/app/coverage.xml ./pychunkedgraph/tests" | |
| - name: Copy coverage report from container | |
| if: always() | |
| run: docker cp pcg-tests:/app/coverage.xml ./coverage.xml | |
| - name: Upload coverage to Codecov | |
| if: always() | |
| uses: codecov/codecov-action@v5 | |
| with: | |
| files: ./coverage.xml | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| slug: CAVEconnectome/PyChunkedGraph | |
| fail_ci_if_error: true | |
| - name: Cleanup | |
| if: always() | |
| run: docker rm pcg-tests || true |