Pages

Additional pages dependencies #75

	# Build and deploy Sphinx docs to GitHub Pages
	name: Pages
	on:
	push:
	branches: ['main']
	workflow_dispatch:

	# Sets permissions of the GITHUB_TOKEN
	permissions:
	contents: read
	pages: write
	id-token: write

	# Allow only one concurrent deployment, skipping runs queued between the run in-progress and latest queued.
	# However, do NOT cancel in-progress runs as we want to allow these production deployments to complete.
	concurrency:
	group: "pages"
	cancel-in-progress: false

	jobs:
	# Clean up disk space
	clean:
	runs-on: ubuntu-latest
	steps:
	- name: Docker clean up
	run: \|
	docker system prune -af
	- name: Delete files
	run: \|
	sudo rm -rf /usr/share/dotnet
	sudo rm -rf /usr/local/share/boost
	sudo rm -rf /opt/hostedtoolcache/go
	sudo rm -rf /tmp/*
	- name: Usage
	run: \|
	df -h
	# Build job
	build:
	runs-on: ubuntu-latest
	needs: clean
	#container:
	# image: ghcr.io/genentech/scimilarity:latest
	steps:
	- uses: actions/checkout@v3
	- name: Install dependencies
	run: \|
	sudo apt install pandoc
	pip install sphinx ipykernel
	pip install -r docs/requirements.txt
	- name: Setup Pages
	id: pages
	uses: actions/configure-pages@v3
	- name: Sphinx build
	run: \|
	sphinx-build -b html docs _build
	- name: Upload artifact
	uses: actions/upload-pages-artifact@v3
	with:
	path: ./_build
	# Deployment job
	deploy:
	environment:
	name: github-pages
	url: ${{ steps.deployment.outputs.page_url }}
	runs-on: ubuntu-latest
	needs: build
	steps:
	- name: Deploy to GitHub Pages
	id: deployment
	uses: actions/deploy-pages@v4

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