ocp-tool/pyproject.toml at master · JanStreffing/ocp-tool · GitHub

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[build-system]
requires = ["setuptools>=61.0", "wheel"]
build-backend = "setuptools.build_meta"

[project]
name = "ocp-tool"
description = "Tool to generate OASIS files for coupling OpenIFS, FESOM2, and NEMO"
authors = [
    {name = "Jan Streffing", email = "jan.streffing@awi.de"}
]
readme = "README.md"
license = {file = "licence"}
requires-python = ">=3.8"
classifiers = [
    "Development Status :: 4 - Beta",
    "Intended Audience :: Science/Research",
    "License :: OSI Approved :: MIT License",
    "Operating System :: OS Independent",
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.8",
    "Programming Language :: Python :: 3.9",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Topic :: Scientific/Engineering :: Atmospheric Science",
]
dependencies = [
    "numpy",
    "netcdf4",
    "eccodes",
    "matplotlib",
    "pandas",
    "pyfesom2 @ git+https://github.com/FESOM/pyfesom2.git@feature/ascii-to-netcdf-performance-optimization",
    "pyyaml",
    "shapely",
    "tqdm",
]
dynamic = ["version"]

[project.urls]
Homepage = "https://github.com/pgierz/ocp-tool"
Repository = "https://github.com/pgierz/ocp-tool"
Issues = "https://github.com/pgierz/ocp-tool/issues"

[project.entry-points."scriptengine.tasks"]
"ocpt.main" = "ocp_tool.scriptengine_task:OCPTool"

[project.optional-dependencies]
dev = [
    "pytest",
    "pytest-cov",
    "black",
    "isort",
    "flake8",
    "mypy",
]
jupyter = [
    "jupyterlab",
    "notebook",
    "ipykernel",
]
docs = [
    "sphinx",
    "sphinx-rtd-theme",
    "nbsphinx",
    "myst-parser",
    "sphinx-autoapi",
]

[tool.setuptools]
packages = ["ocp_tool"]

[tool.setuptools.dynamic]
version = {attr = "ocp_tool.__version__"}

# Pixi configuration
[tool.pixi.workspace]
name = "ocp-tool"
description = "Tool to generate OASIS files for coupling OpenIFS, FESOM2, and NEMO"
authors = ["Jan Streffing <jan.streffing@awi.de>"]
channels = ["conda-forge", "bioconda", "eumetsat"]
platforms = ["linux-64", "linux-aarch64", "osx-64", "osx-arm64"]

[tool.pixi.dependencies]
python = ">=3.9"
numpy = "*"
scipy = "*"
netcdf4 = "*"
xarray = "*"
matplotlib = "*"
cartopy = "*"
pandas = "*"
pyyaml = "*"
python-eccodes = "*"
pip = "*"

[tool.pixi.pypi-dependencies]
# Use modernized pyfesom2 branch with Python 3.11+ support
pyfesom2 = { git = "https://github.com/FESOM/pyfesom2.git", branch = "modernize-packaging" }

[tool.pixi.feature.jupyter.dependencies]
jupyterlab = "*"
notebook = "*"
ipykernel = "*"

[tool.pixi.feature.dev.dependencies]
pytest = "*"
pytest-cov = "*"
black = "*"
isort = "*"
flake8 = "*"
mypy = "*"

[tool.pixi.feature.docs.dependencies]
sphinx = "*"
sphinx-rtd-theme = "*"
nbsphinx = "*"
myst-parser = "*"
sphinx-autoapi = "*"

[tool.pixi.environments]
default = { solve-group = "default" }
jupyter = { features = ["jupyter"], solve-group = "default" }
dev = { features = ["dev"], solve-group = "default" }
docs = { features = ["docs"], solve-group = "default" }
full = { features = ["jupyter", "dev", "docs"], solve-group = "default" }

[tool.pixi.tasks]
lint = "flake8 ocp_tool"
format = "black ocp_tool"
sort-imports = "isort ocp_tool"
type-check = "mypy ocp_tool"
test = "pytest"
clean-format = { depends-on = ["format", "sort-imports"] }
jupyter = "jupyter lab"
notebook = "jupyter notebook"
docs-build = "sphinx-build -W -b html docs/source docs/build/html"
docs-clean = "rm -rf docs/build"
docs-serve = "python -m http.server 8000 --directory docs/build/html"
workflow-dry = { cmd = "snakemake --dry-run", cwd = "workflow" }
workflow-lint = { cmd = "snakemake --lint", cwd = "workflow" }
workflow-run = { cmd = "snakemake --cores 4 --use-conda", cwd = "workflow" }
build = "python -m build"
install-dev = "pip install -e ."

[tool.black]
line-length = 88
target-version = ['py38']
include = '\.pyi?$'
extend-exclude = '''
/(
  # directories
  \.eggs
  | \.git
  | \.hg
  | \.mypy_cache
  | \.tox
  | \.venv
  | build
  | dist
)/
'''

[tool.isort]
profile = "black"
multi_line_output = 3
line_length = 88
known_first_party = ["ocp_tool"]

[tool.pytest.ini_options]
testpaths = ["tests"]
python_files = ["test_*.py", "*_test.py"]
python_classes = ["Test*"]
python_functions = ["test_*"]
addopts = [
    "--strict-markers",
    "--strict-config",
    "--cov=ocp_tool",
    "--cov-report=term-missing",
    "--cov-report=html",
]