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process_mark.py
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150 lines (144 loc) · 4.84 KB
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# -*- coding: utf-8 -*-
"""
根据手工标注的标签生成npy文件,每个npy文件保存了一个二维数组(width, height, 8+1),
前8个通道是图像数据,最后一个通道是标签
"""
import os
import sys
import glob
import json
import tqdm
import skimage.io
import numpy as np
import matplotlib.pyplot as plt
def find_bnd(img):
"""
从标签图像中找到标注的区域(矩形),标签图像是与卫星图大小一致的RGBA图像,未标注的
区域为黑色,标注的区域如果是房子变化则为红色,否则为透明(四通道数值均为0)。
"""
r_s = -1
r_e = -1
c_s = -1
c_e = -1
fg = False
r_m = -1
c_m = -1
for i in range(0, img.shape[0], 256):
if fg:
break
for j in range(0, img.shape[1], 256):
if img[i, j, 0] > 0 or img[i,j,3] == 0:
r_m = i
c_m = j
fg = True
break
if r_m < 0 or c_m < 0:
return r_s, r_e, c_s, c_e
r_s = r_m
c_s = c_m
while img[r_s, c_m, 0] > 0 or img[r_s, c_m, 3] == 0:
r_s -= 1
r_s += 1
while img[r_m, c_s, 0] > 0 or img[r_m, c_s, 3] == 0:
c_s -= 1
c_s += 1
r_e = r_m+1
c_e = c_m+1
while img[r_e, c_m, 0] > 0 or img[r_e, c_m, 3] == 0:
r_e += 1
while img[r_m, c_e, 0] > 0 or img[r_m, c_e, 3] == 0:
c_e += 1
return r_s, r_e, c_s, c_e
def prepare_end2end_data(path15, path17, input_dir, output_dir, base=0, suffix='p2'):
"""
将标注的标签图像转换成npy文件。
"""
if not os.path.exists(output_dir):
os.makedirs(output_dir)
im15 = skimage.io.imread(path15).astype(np.float32)
im17 = skimage.io.imread(path17).astype(np.float32)
masks = glob.glob(os.path.join(input_dir, '*.tif'))
data_dir = output_dir
if not os.path.exists(data_dir):
os.makedirs(data_dir)
for mp in tqdm.tqdm(masks):
msk = skimage.io.imread(mp)
r_s, r_e, c_s, c_e = find_bnd(msk)
if r_s < 0:
print('%s无效!'%mp, file=sys.stderr)
continue
d15 = im15[r_s:r_e, c_s:c_e, :]
d17 = im17[r_s:r_e, c_s:c_e, :]
m = msk[r_s:r_e, c_s:c_e, 0]
lab = m > 0
lab = lab.astype(d15.dtype)
lab = np.expand_dims(lab, 2)
d = np.concatenate([d15, d17, lab], 2)
vp = d.shape[0]//2
hp = d.shape[1]//2
lst = [d[:vp, :hp, :], d[vp:, :hp, :], d[:vp, hp:, :], d[vp:, hp:, :]]
cord = [(r_s, c_s), (r_s+vp, c_s), (r_s, c_s+hp), (r_s+vp, c_s+hp)]
_, n = os.path.split(mp)
n, _ = os.path.splitext(n)
for k in range(len(lst)):
r, c = cord[k]
dp = os.path.join(data_dir, '%d_%d_%d#%d_%s.npy'%(base, k, r, c, suffix))
np.save(dp, lst[k])
base += 1
def end2end_split(data_dir, splits=None):
"""
将npy文件划分成训练集、验证集和测试集
"""
if splits is None:
splits = [0.7, 0.9]
assert splits[0] < splits[1]
dat_all = glob.glob(os.path.join(data_dir, '*.npy'))
np.random.shuffle(dat_all)
for k in range(len(dat_all)):
_, dat_all[k] = os.path.split(dat_all[k])
mp = {}
sp1 = int(len(dat_all)*splits[0])
sp2 = int(len(dat_all)*splits[1])
mp['train'] = dat_all[:sp1]
mp['validation'] = dat_all[sp1:sp2]
mp['test'] = dat_all[sp2:]
if data_dir[-1] == '/' or data_dir[-1] == '\\':
_, dir_name = os.path.split(data_dir[:-1])
else:
_, dir_name = os.path.split(data_dir)
with open(os.path.join(data_dir, '%s_train_val_test.json'%dir_name), 'w') as file:
file.write(json.dumps(mp))
def end2end_data_view(input_dir, part='validation'):
"""
查看训练集、验证集或测试集里的图像
"""
mp = glob.glob(os.path.join(input_dir, '*.json'))[0]
mp = json.load(open(mp))
paths = mp[part]
for p in paths:
t = os.path.join(input_dir, p)
x = np.load(t)
im15 = skimage.img_as_ubyte(x[:,:,:3].astype(np.uint16))
im17 = skimage.img_as_ubyte(x[:,:,4:7].astype(np.uint16))
msk = x[:,:,-1].astype(np.uint8)
msk *= 90
msk += 255-90
msk = np.expand_dims(msk, 2)
im15 = np.concatenate([im15, msk],2)
im17 = np.concatenate([im17, msk],2)
plt.subplot(1,2,1)
plt.imshow(im15)
plt.title('2015')
plt.suptitle(p)
plt.subplot(1,2,2)
plt.imshow(im17)
plt.title('2017')
plt.show()
if __name__ == '__main__':
prepare_end2end_data(
'../../input/origin/2015p2-denoise-rgbn.tif',
'../../input/origin/2017p2-denoise-rgbn.tif',
'../../input/mark/p2_end2end_1102/',
'../../input/mark/p2_test/', base=0, suffix='p2')
end2end_split('../../input/mark/p2_test/')
end2end_data_view('../../input/mark/p2_test/', part='validation')