Either some reviews or important insights:
- Evaluating methods of inferring gene regulatory networks highlights their lack of performance for single cell gene expression data: study shows that gene regulatory networks on single-cell don't work
- Also was mentioned in Best Practices from Theis
- Dimensionality reduction for visualizing single-cell data using UMAP: Comparison of UMAP with other methods
- Accuracy, Robustness and Scalability of Dimensionality Reduction Methods for Single Cell RNAseq Analysis: comparison of dimensionality reduction methods
Datasets:
- CellBench: Ground-truth datasets for benchmarking
- Benchmarking Single-Cell RNA Sequencing Protocols for Cell Atlas Projects