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Reviewer's guide (collapsed on small PRs)Reviewer's GuideThis PR revises the changelog for 0.16.4 by updating the release date, refining feature entries, and adding new items across Documentation, Testing, Miscellaneous, and Security sections. File-Level Changes
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Note Other AI code review bot(s) detectedCodeRabbit has detected other AI code review bot(s) in this pull request and will avoid duplicating their findings in the review comments. This may lead to a less comprehensive review. WalkthroughChangelog and related config files updated: 0.16.4 release date adjusted; a feature entry for saving/reading time scale in ImageJ and OME‑TIFF files added; a new Changes
Sequence Diagram(s)sequenceDiagram
autonumber
participant User
participant App as "App / CLI"
participant IO as "Image (ImageJ / OME‑TIFF)"
Note right of App #DDEEFF: Documented change — read/write time scale metadata
User->>App: Open or Save image
App->>IO: Read/Write metadata (time scale)
IO-->>App: Return/Confirm time scale metadata
App-->>User: Display/confirm persisted time scale
Estimated code review effort🎯 2 (Simple) | ⏱️ ~10 minutes Possibly related PRs
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Hey there - I've reviewed your changes and they look great!
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Please address the comments from this code review:
## Individual Comments
### Comment 1
<location> `changelog.md:10-11` </location>
<code_context>
- Set units for viewer spawned from the view menu ([#1308](https://github.com/4DNucleome/PartSeg/pull/1308))
-- Add saving color maps in OME tiffs ([#1312](https://github.com/4DNucleome/PartSeg/pull/1312))
+- Add saving color maps in SOME tiffs ([#1312](https://github.com/4DNucleome/PartSeg/pull/1312))
+- Add saving and reading of time scale in ImageJ and SOME TIFF files ([#1323](https://github.com/4DNucleome/PartSeg/pull/1323))
### 🐛 Bug Fixes
</code_context>
<issue_to_address>
**issue (typo):** Possible typo: 'SOME tiffs' should likely be 'OME tiffs'.
Please clarify whether 'SOME TIFF' is correct or if it should be 'OME-TIFF'.
```suggestion
- Add saving color maps in OME tiffs ([#1312](https://github.com/4DNucleome/PartSeg/pull/1312))
- Add saving and reading of time scale in ImageJ and OME TIFF files ([#1323](https://github.com/4DNucleome/PartSeg/pull/1323))
```
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Actionable comments posted: 1
🧹 Nitpick comments (1)
changelog.md (1)
21-23: Reconsider the self-referential Documentation entry.Line 23 documents "Update changelog for 0.16.4"—an entry about updating the changelog that appears in the changelog itself. This is somewhat circular and may clutter the release notes. Consider either removing this entry or moving it to the Miscellaneous Tasks section if it's intended to highlight the release notes maintenance work.
If this entry is necessary, consider moving it to the Miscellaneous Tasks section (after line 38) for better categorization, or remove it entirely if it's not user-facing value.
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.typos.toml(1 hunks)MANIFEST.in(1 hunks)changelog.md(4 hunks)cliff.toml(1 hunks)
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- GitHub Check: Base py3.11 / macos-15-intel py 3.11 latest PyQt5
- GitHub Check: 4DNucleome.PartSeg (Tests_linux test_linux)
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- GitHub Check: 4DNucleome.PartSeg (formatting_check check_formating)
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🔇 Additional comments (1)
cliff.toml (1)
50-57: Configuration update aligns with .typos.toml integration.The changes to disable the square-bracket escape pattern (line 53) and explicitly point the typos preprocessor to the new
.typos.tomlconfig (line 56) are appropriate. This ensures spell-checking uses the local terminology extensions (OME, OME-TIFF, etc.) during commit message preprocessing.
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Summary by Sourcery
Update the changelog for version 0.16.4 with the correct release date and include all notable feature additions, dependency upgrades, formatting changes, and security bumps.
New Features:
Documentation:
Tests:
Chores:
Summary by CodeRabbit
New Features
Documentation
Testing/Automation
Miscellaneous
Security