Fix links

[jmaspons]

Fix #1140

Fix the following broken links in the gh-pages branch:

S'han trobat 39 coincidències (39 marcades) a la carpeta ./Agents.jl/dev/
api/index.html: 28
  2:8508: ructures <a href="#Agents.AgentBasedModel"><code>AgentBasedModel</code></a>, <a href="@ref Space">Space</a>, <a href="#Agents.AbstractAgent"><code>AbstractAgent</code></a> which are describe
  2:10331: ightforward to create your own versions of <code>AgentBasedModel</code>, see <a href="@ref make_new_model">the corresponding entry in the developer documentation</a>.</p><p><strong>Interface
  2:11120:  model. All models start from time 0 and time is incremented as the model is <a href="@ref"><code>step!</code></a>-ped.</li><li><code>abmrng(model)</code> will return the random number gener
  2:14512: es.</p><p><code>space</code> is a subtype of <code>AbstractSpace</code>, see <a href="@ref Space">Space</a> for all available spaces. If it is omitted then all agents are virtually in one po
 20:4686: es.</p><p><code>space</code> is a subtype of <code>AbstractSpace</code>, see <a href="@ref Space">Space</a> for all available spaces.</p><p><code>events</code> is a container of instances of
 20:6453: s="admonition-body"><p>This model does not yet support IO operations such as <a href="@ref"><code>save_checkpoint</code></a>. Pull Requests that implement this are welcomed!</p></div></div><
 20:7352: ensity, kinds, timing)</code></pre><p>An event instance that can be given to <a href="@ref"><code>EventQeueABM</code></a>.</p><ul><li><code>action! = dummystep</code>: is the function <code>
 73:1317: nts types.</p><p>See the <a href="../tutorial/#Tutorial">Tutorial</a> or the <a href="@ref multiagent_vs_union">performance comparison versus <code>Union</code> types</a> for why it is often
 89:1194: ng> the <code>id::Int</code> field as first field. If any space is used (see <a href="@ref">Available spaces</a>), a <code>pos</code> field of appropriate type is also mandatory. The core mo
 89:6777: t &lt;: AbstractAgent</code></pre><p>The minimal agent struct for usage with <a href="@ref"><code>OpenStreetMapSpace</code></a>. It has an additional field <code>pos::Tuple{Int,Int,Float64}<
 92:5902: quot; from Agents.jl. To create your own, see the developer documentation on <a href="@ref make_new_space">creating a new space type</a>.</p><h3 id="Discrete-spaces"><a class="docs-heading-a
 92:10343: code>i</code>-th dimension.</p><p>An example using <code>GridSpace</code> is <a href="@ref">Schelling&#39;s segregation model</a>.</p><p><strong>Distance specification</strong></p><p>The typ
 92:17263:  properties in conjunction with <code>ContinuousSpace</code>.</p><p>See also <a href="@ref">Continuous space exclusives</a> on the online docs for more functionality. An example using contin
 95:684: s an agent can truly be at any possible point on an existing road.</p><p>Use <a href="@ref"><code>OSMAgent</code></a> for convenience.</p><p><strong>Obtaining map files</strong></p><p>Maps f
122:2502: /a>/<a href="#Agents.ContinuousSpace"><code>ContinuousSpace</code></a> using <a href="@ref"><code>Pathfinding.Pathfinder</code></a>, a special movement method is available.</p><article class
124:5986: del::ABM)</code></pre><p>Return the size of the model&#39;s space. Works for <a href="@ref"><code>AbstractGridSpace</code></a> and <a href="#Agents.ContinuousSpace"><code>ContinuousSpace</co
125:1220: ition</code></a>, but specialized for <code>GridSpaceSingle</code>. See also <a href="@ref"><code>isempty</code></a>.</p></div><a class="docs-sourcelink" target="_blank" href="https://github
129:17561: ode>:exact</code> or <code>:approximate</code>.</li></ul><p>Example usage in <a href="@ref">https://juliadynamics.github.io/AgentsExampleZoo.jl/dev/examples/growing_bacteria/</a>.</p><div cl
131:4332:  map requires <code>network_type = :none</code> to be passed as a keyword to <a href="@ref"><code>OSMSpace</code></a>. The unit of distance used for this map is <code>:time</code>.</p></div>
154:1258: ABM, t::Union{Real, Function}; kwargs...)</code></pre><p>Run the model (call <a href="@ref"><code>step!</code></a><code>(model, t)</code> and collect data specified by the keywords, explaine
154:9247: ;s initial random seed and/or agent distribution.</p><p>See example usage in <a href="@ref">Schelling&#39;s segregation model</a>.</p><p><strong>Keywords</strong></p><p>The following keyword
154:14364: trong></p><p>A runnable example that uses <code>paramscan</code> is shown in <a href="@ref">Schelling&#39;s segregation model</a>. There, we define</p><pre><code class="language-julia hljs">
187:1598: will return the scheduled IDs.</li><li>Can be used by a user when performing <a href="@ref manual_scheduling">manual scheduling</a> in case <code>agent_step!</code> has not been configured.<
187:8493: _union</code> is a <code>Union</code> of all valid agent types (as passed to <a href="@ref"><code>ABM</code></a>)</li></ul><pre><code class="nohighlight hljs">Schedulers.ByType((C, B, A), sh
202:570:  define your fundamental types at all processors. How to do this is shown in <a href="@ref">Ensembles and distributed computing</a> section of Schelling&#39;s Segregation Model example. See 
202:2833: ithub.io/AgentsExampleZoo.jl/dev/examples/runners/">Mountain Runners</a> and <a href="@ref">Rabbit, Fox, Hawk</a> examples using path-finding and see the available functions below as well.</
202:5238: </li></ul><p>Utilization of all features of <code>AStar</code> occurs in the <a href="@ref">3D Mixed-Agent Ecosystem with Pathfinding</a> example.</p></div><a class="docs-sourcelink" target=
223:1189: n!(model, t::Union{Real, Function}; kwargs...)</code></pre><p>Do the same as <a href="@ref"><code>run</code></a>, but instead of collecting all the data into an in-memory dataframe, write th
devdocs/index.html: 2
  2:9424: ocs-heading-anchor" href="#[Creating-a-new-model-type](@ref-make_new_model)"><a href="@ref make_new_model">Creating a new model type</a></a><a id="[Creating-a-new-model-type](@ref-make_new_m
  2:11268: ocs-heading-anchor" href="#[Creating-a-new-space-type](@ref-make_new_space)"><a href="@ref make_new_space">Creating a new space type</a></a><a id="[Creating-a-new-space-type](@ref-make_new_s
examples/event_rock_paper_scissors/index.html: 1
 72:393: ink" href="#Time-evolution" title="Permalink"></a></h2><p>Time evolution for <a href="@ref"><code>EventBasedABM</code></a> is identical to that of <a href="../../api/#Agents.StandardABM"><co
examples/measurements/index.html: 3
  2:7216:  with much of the Julia ecosystem.</p><p>Here, we&#39;ll slightly modify the <a href="@ref">Daisyworld</a> example, to simulate some measurement uncertainty in our world&#39;s parameters.</p
 13:721: for DaisyWorld. If you want to know what each of these functions do, see the <a href="@ref">Daisyworld</a> example, as they are copied directly from there.</p><pre><code class="language-juli
129:782:  href="#Visualizing-the-Result" title="Permalink"></a></h2><p>Similar to the <a href="@ref">Daisyworld</a> example, we will now check out how the surface temperature and daisy count fares wh
examples/predator_prey/index.html: 1
  4:2965: lly that much of an advantage to have two different agent types. Like in the <a href="@ref">Rabbit, Fox, Hawk</a> example, we could have only one type and one additional field to separate th
index.html: 1
 18:2535: planet, or whatever else) by only extending 5 functions, as discussed in our <a href="@ref">Creating a new space type</a> documentation. Indeed, the simplicity of Agents.jl is due to the int
performance_tips/index.html: 2
 40:1330: d increase in performance.</p><p>For an example of how this is done, see the <a href="@ref">Forest fire</a> model, which is a cellular automaton that has no agents in it, or the <a href="@re
 40:1431: re</a> model, which is a cellular automaton that has no agents in it, or the <a href="@ref">Daisyworld</a> model, which has both agents as well as a spatial property represented by an <code>
tutorial/index.html: 1
197:453:  evolve it forwards in time. This step is rather trivial. We simply call the <a href="@ref"><code>step!</code></a> function on the model</p><pre><code class="language-julia hljs">step!(schel

TODO:

• 125:1220: ition</code></a>, but specialized for <code>GridSpaceSingle</code>. See also <a href="@ref"><code>isempty</code></a>.</p></div><a class="docs-sourcelink" target="_blank" href="https://github Missing docstring for isempty(::Integer, ::ABM). Check Documenter's build log for details.

• 124:5986: del::ABM)</code></pre><p>Return the size of the model&#39;s space. Works for <a href="@ref"><code>AbstractGridSpace</code></a> and <a href="#Agents.ContinuousSpace"><code>ContinuousSpace</co Missing docstring. Add abstract classes to API docs?

• Missing docstring for schedule. Check Documenter's build log for details.

• Backport?

Review

• 202:570: define your fundamental types at all processors. How to do this is shown in <a href="@ref">Ensembles and distributed computing</a> section of Schelling&#39;s Segregation Model example. NOT ANYMORE 98c5fd2
• Not sure if this is the proper fix for docs in submodules 46329ba

[codecov-commenter]

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 85.00%. Comparing base (8b5b456) to head (8add7a6).
Report is 176 commits behind head on main.

Additional details and impacted files

@@             Coverage Diff             @@
##             main    #1141       +/-   ##
===========================================
+ Coverage   70.12%   85.00%   +14.87%     
===========================================
  Files          42       37        -5     
  Lines        2718     2534      -184     
===========================================
+ Hits         1906     2154      +248     
+ Misses        812      380      -432     

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[Datseris]

Thank you, this is fantastic and very helkpful!

[Datseris]

Thank you this is very helpful!

[jmaspons]

There are still some TODOs. I'll do a grep with the new docs in gh-pages