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* minimally functioning sam parser * Update io/sam/sam.go Co-authored-by: Willow Carretero Chavez <sandiegobutterflies@gmail.com> * few udpates from comments * Update io/sam/sam.go Co-authored-by: Willow Carretero Chavez <sandiegobutterflies@gmail.com> * Update io/sam/sam.go Co-authored-by: Willow Carretero Chavez <sandiegobutterflies@gmail.com> * add validate * Update io/sam/sam.go Co-authored-by: Willow Carretero Chavez <sandiegobutterflies@gmail.com> * fixed sam_test * Add in bio parser * Updated sam to be in bio * add package level docs * Wrote WriteTo, still need testing * make linter happy * Noted Validate as not implemented * add validate function * fully test validate functions * fixed mapq and added more coverage --------- Co-authored-by: Willow Carretero Chavez <sandiegobutterflies@gmail.com>
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Need to add documentation, but this seems to work. |
Koeng101
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Jan 2, 2024
* init minimap2 * add test-lib * Samtools (#47) * add samtools (without documentation) to minimap2 branch. * add better docs to samtools
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Adds samtools to minimap2