Update actions ci to remove warnings

[mcbarton]

This PR should remove all warnings outputted by the ci running, due to outdated actions.

[codecov-commenter]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 49.39%. Comparing base (bb9bb85) to head (38c9fec).
⚠️ Report is 252 commits behind head on main.

Additional details and impacted files

@@            Coverage Diff             @@
##             main      #65      +/-   ##
==========================================
+ Coverage   49.14%   49.39%   +0.24%     
==========================================
  Files          15       15              
  Lines         643      575      -68     
==========================================
- Hits          316      284      -32     
+ Misses        327      291      -36     

see 12 files with indirect coverage changes
see 12 files with indirect coverage changes

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[mcbarton]

@vgvassilev All actions have been updated (checkout, codecov-action and provision-with-micromamba) so that all warnings are gone when the ci runs. I consider this PR ready for review.