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update interactive tools #610

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update interactive tools #610

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37 changes: 32 additions & 5 deletions communities/imaging/lab/sections/2_tools.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -108,25 +108,52 @@ tabs:
- datatypes:
- data
button_link: "{{ galaxy_base_url }}/root?tool_id=interactive_tool_anylabeling"
- title_md: interactive_tool_ilastik
- title_md: interactive_tool_bellavista
description_md: >
Interactive machine learning and segmentation toolkit
Interactive data exploration
inputs:
- datatypes:
- data
button_link: "{{ galaxy_base_url }}/root?tool_id=interactive_tool_ilastik"
button_link: "{{ galaxy_base_url }}/root?tool_id=interactive_tool_bellavista"
- title_md: interactive_tool_cellpose
description_md: >
Tool for cell and nucleus segmentation
inputs:
- datatypes:
- data
button_link: "{{ galaxy_base_url }}/root?tool_id=interactive_tool_cellpose"
- title_md: interactive_tool_cellprofiler
description_md: >
Image analysis software for identifying and quantifying cell phenotypes
inputs:
- datatypes:
- data
button_link: "{{ galaxy_base_url }}/root?tool_id=interactive_tool_cellprofiler"
- title_md: interactive_tool_cellxgene
description_md: >
Tool to deploy browser for visualization of single cell RNAseq data
inputs:
- datatypes:
- data
button_link: "{{ galaxy_base_url }}/root?tool_id=interactive_tool_cellxgene"
- title_md: interactive_tool_ilastik
description_md: >
Interactive machine learning and segmentation toolkit
inputs:
- datatypes:
- data
button_link: "{{ galaxy_base_url }}/root?tool_id=interactive_tool_ilastik"
- title_md: interactive_tool_napari
description_md: >
interactive tool
Interactive data exploration
inputs:
- datatypes:
- data
button_link: "{{ galaxy_base_url }}/root?tool_id=interactive_tool_napari"

- title_md: interactive_tool_qupath
description_md: >
Interactive tool for quantification of electrophoresis gel bands
inputs:
- datatypes:
- data
button_link: "{{ galaxy_base_url }}/root?tool_id=interactive_tool_qupath"