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This should be the general strategy for collecting input and output files for ARC, DIRAC, AWS batch etc.
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Change base image from `conda/miniconda3` (based off Debian Stretch) to `python:3.12-bookworm`. Miniconda is not required in the base image. Add the Galaxy Depot repository, which provides SLURM DRMAA packages for Debian Buster and newer releases. Do not install the package `apt-transport-https`, it is now a dummy package, see https://packages.debian.org/en/bookworm/apt-transport-https. Install the package `slurm` instead of `slurm-llnl`. Newer versions of the `munge` package include the binary `/usr/sbin/mungekey` instead of `/usr/sbin/create-munge-key`. Nevertheless, the key seems to be created automatically when installing the package, as running `mungekey` yields 'mungekey: Error: Failed to create "/etc/munge/munge.key": File exists'.
Build wheel automatically when building the Docker image. Exclude the source code from the output image through a multistage build.
Restore original test behavior but adapting the code to make room for a new test `CliCommandLineAppConfigTestCase`. For now, remove the draft code for `CliCommandLineAppConfigTestCase`.
`"files_endpoint"` is the name used and expected throughout the rest of the code (including test_cli_submit.py).
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