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Popular repositories Loading

  1. nf-cosimflow123 nf-cosimflow123 Public

    a workflow to calculate cosine similarity in Nextflow

    R 3 1

  2. adaptive-conformal-omics adaptive-conformal-omics Public

    Uncertainty quantification for heteroscedastic single-cell data using Conformalized Quantile Regression

    Jupyter Notebook 2

  3. rna-seq-egfr-resistance rna-seq-egfr-resistance Public

    Reproducible RNA-seq pipeline (Salmon+tximport+DESeq2) identifying candidate drivers of erlotinib resistance in NSCLC (GSE121634)

    HTML 1

  4. nf-cosimflow nf-cosimflow Public

    A Nextflow subworkflow to compute pairwise cosine similarity matrices and generate heatmaps from gene expression data.

    Nextflow 1

  5. nf-core-manifold nf-core-manifold Public

    nf-core/manifold: A Nextflow pipeline for multi-scale scRNA-seq analysis. It integrates differential geometry (PHATE), Topological Data Analysis (TDA), and causal inference to map cellular manifold…

    Python 1

  6. Data-analysis-of-E.coli Data-analysis-of-E.coli Public

    Data and statistical analysis of data related to the E. Coli