CTNG cleanup

[ramcdougal]

Removed legacy code, updated to Cython3, refactored large functions, updated string formatting to use f-strings.

[github-actions]

✔️ 71d0c5f -> artifacts URL

[github-actions]

✔️ 6287d70 -> artifacts URL

[azure-pipelines]

✔️ 6287d70 -> Azure artifacts URL

[github-actions]

✔️ 8a96a8b -> artifacts URL

[github-actions]

✔️ 6b95fe3 -> artifacts URL

[github-actions]

✔️ ece47a1 -> artifacts URL

[github-actions]

✔️ 529a0e8 -> artifacts URL

[github-actions]

✔️ 5d91d74 -> artifacts URL

[github-actions]

✔️ 88a388f -> artifacts URL

[azure-pipelines]

✔️ 88a388f -> Azure artifacts URL

[github-actions]

✔️ e0d083a -> artifacts URL

[github-actions]

✔️ c1f2b22 -> artifacts URL

[azure-pipelines]

✔️ c1f2b22 -> Azure artifacts URL

[codecov]

Codecov Report

❌ Patch coverage is 80.00000% with 1 line in your changes missing coverage. Please review.
✅ Project coverage is 68.45%. Comparing base (cb7e00c) to head (7a98c1d).
⚠️ Report is 2 commits behind head on master.

Files with missing lines	Patch %	Lines
...lib/python/neuron/rxd/geometry3d/triangularMesh.py	0.00%	1 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##           master    #3564      +/-   ##
==========================================
+ Coverage   68.36%   68.45%   +0.08%     
==========================================
  Files         684      681       -3     
  Lines      116681   116608      -73     
==========================================
+ Hits        79766    79821      +55     
+ Misses      36915    36787     -128     

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

🚀 New features to boost your workflow:

• ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.
• 📦 JS Bundle Analysis: Save yourself from yourself by tracking and limiting bundle sizes in JS merges.

[ramcdougal]

The rationale for all this is that cleaning up the code will make it easier to work on it further. In particular, the mesh creation for CTNG could be done in parallel (although this is a little complicated by the flood fill approach, but we could definitely do it for the surface voxels).

[nrnhines]

Not that I fully understand but this approval allows you to keep moving forward :)

[github-actions]

✔️ 624b572 -> artifacts URL

[azure-pipelines]

✔️ 624b572 -> Azure artifacts URL

[github-actions]

✔️ d6ccecd -> artifacts URL

[azure-pipelines]

✔️ d6ccecd -> Azure artifacts URL

[github-actions]

✔️ 2bbe75b -> artifacts URL

[azure-pipelines]

✔️ 2bbe75b -> Azure artifacts URL

[sonarqubecloud]

Quality Gate passed

Issues
0 New issues
0 Accepted issues

Measures
0 Security Hotspots
0.0% Coverage on New Code
0.0% Duplication on New Code

See analysis details on SonarQube Cloud

[github-actions]

✔️ 1f59aca -> artifacts URL

[github-actions]

✔️ 7a98c1d -> artifacts URL

[azure-pipelines]

✔️ 7a98c1d -> Azure artifacts URL