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    54 repositories

    • biochef-hub

      Public
      Build-and-publish do BioChef. Valida receitas, compila (biowasm/emscripten/native), testa e publica no Registry.
      Python
      •
      MIT License
      •0•0•3•1•Updated Apr 30, 2026Apr 30, 2026

    • Biochef

      Public
      BioChef a tool for fast browser tests in genome and proteome.
      JavaScript
      •
      MIT License
      •1•6•6•1•Updated Apr 30, 2026Apr 30, 2026

    • BiochefPage

      Public
      Webpage for Biochef
      Astro
      •0•0•0•0•Updated Apr 28, 2026Apr 28, 2026

    • DL-MTSAD

      Public
      HTML
      •0•0•0•0•Updated Apr 24, 2026Apr 24, 2026

    • biochef-recipes

      Public
      Hub of Biochef recipes
      MIT License
      •0•0•0•0•Updated Apr 21, 2026Apr 21, 2026

    • Multi-Head-CRF

      Public
      Python
      •
      MIT License
      •0•5•0•0•Updated Mar 2, 2026Mar 2, 2026

    • CoPipes

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Feb 25, 2026Feb 25, 2026

    • HYMET

      Public
      HYMET: A Hybrid Metagenomic Pipeline for Accurate and Efficient Taxonomic Classification
      Python
      •
      MIT License
      •2•0•0•0•Updated Feb 14, 2026Feb 14, 2026

    • SIEM-in-a-box

      Public
      Shell
      •1•0•0•0•Updated Feb 11, 2026Feb 11, 2026

    • VCFX

      Public
      VCFX is a collection of specialized C/C++ command-line tools designed for efficient manipulation, analysis, and transformation of VCF files.
      genomicscpptoolkit
      genomicscpptoolkitvcf
      C++
      •
      MIT License
      •1•2•0•0•Updated Dec 18, 2025Dec 18, 2025

    • BioGraphletQA

      Public
      Jupyter Notebook
      •
      MIT License
      •0•3•1•0•Updated Oct 20, 2025Oct 20, 2025

    • fed_rf

      Public
      Python
      •
      MIT License
      •3•3•0•0•Updated Sep 29, 2025Sep 29, 2025

    • pruning

      Public
      A Gradient-Based Approach to Adaptive Neural Network Pruning
      Python
      •0•0•0•0•Updated Sep 3, 2025Sep 3, 2025

    • Controlled-Health-Answer-Generation

      Public
      Repository for paper "A Framework for Fine-Grained Complexity Control in Health Answer Generation", Ferreira et al., ACL 2025
      Python
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Jul 31, 2025Jul 31, 2025

    • SMM4H2025

      Public
      Python
      •0•0•0•0•Updated Jun 17, 2025Jun 17, 2025

    • sarif-orchestrator

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Mar 29, 2025Mar 29, 2025

    • HPC-guides

      Public
      0•2•0•0•Updated Feb 21, 2025Feb 21, 2025

    • BioNExt

      Public
      A Biomedical Novelty Relation Extractor System
      Python
      •
      MIT License
      •1•8•1•0•Updated Jul 22, 2024Jul 22, 2024

    • HK-FG

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Jun 23, 2024Jun 23, 2024

    • Market-Profiles

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Jun 18, 2024Jun 18, 2024

    • nlp-trends

      Public
      Python
      •
      MIT License
      •0•1•0•0•Updated May 23, 2024May 23, 2024

    • SPARe

      Public
      python package for performing sparse-retrieval on accelerated hardware
      Python
      •
      Apache License 2.0
      •0•3•0•0•Updated Mar 28, 2024Mar 28, 2024

    • BC8-SympTEMIST

      Public
      BioCreative VIII track 2
      biomedical-nlp
      biomedical-nlp
      Python
      •
      MIT License
      •0•1•0•0•Updated Mar 4, 2024Mar 4, 2024

    • SynQGen

      Public
      Python package for generating synthetic questions for Information Retrieval
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated Feb 1, 2024Feb 1, 2024

    • autolens

      Public
      Automated & Augmented ML Toolbox for Image Classification
      Python
      •
      Other
      •3•0•0•0•Updated Dec 5, 2023Dec 5, 2023

    • BioASQ_11B

      Public
      biomedical-nlp
      biomedical-nlp
      Shell
      •0•0•0•0•Updated Nov 27, 2023Nov 27, 2023

    • MedProcNER

      Public
      biomedical-nlp
      biomedical-nlp
      Python
      •0•2•0•0•Updated Oct 16, 2023Oct 16, 2023

    • xgTaxonomy

      Public
      Python
      •2•1•0•0•Updated Sep 18, 2023Sep 18, 2023

    • vpn-idp

      Public
      Authentication in WireGuard VPNs with Identity Providers and OAuth 2.0.
      pythonflaskdjango
      pythonflaskdjangooauth2vpnidpwireguard
      Python
      •
      MIT License
      •0•6•0•0•Updated Jul 31, 2023Jul 31, 2023

    • GeoDropdown.js

      Public
      Geo Dropdown component for javascript
      JavaScript
      •2•1•2•3•Updated Jul 18, 2023Jul 18, 2023
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