not being able to read a tabix file over http

[Asppagh]

Hi,
I have problem reading the seqminer::tabix.read.table function to read from http over AWS S3 storage.
I get the following error:

[khttp_connect_file] fail to open file (HTTP code: 0).
Cannot open specified tabix file:

However, With the same setting, I don't get any error using tabix tool itself.
Could anyone give me any clue what could be the cause of this error?
Thanks

[zhanxw]

That’s because tabix is build upon the latest htslib which is not incorporated/implemented in seqminer yet. I have several deadlines and cannot implement it right now. Sorry about that. Sent from my iPhoneOn Jan 26, 2023, at 1:53 PM, Ahmad.Samiei ***@***.***> wrote: Hi, I have problem reading the seqminer::tabix.read.table function to read from http over AWS S3 storage. I get the following error: [khttp_connect_file] fail to open file (HTTP code: 0). Cannot open specified tabix file: However, With the same setting, I don't get any error using tabix tool itself. Could anyone give me any clue what could be the cause of this error? Thanks —Reply to this email directly, view it on GitHub, or unsubscribe.You are receiving this because you are subscribed to this thread.Message ID: ***@***.***>